PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00817.1.g00060.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 406aa    MW: 43246.6 Da    PI: 10.4456
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00817.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.5e-11254299550
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                   kr++r + NR +A rs +RK  +i eLe+kv++L++e ++L  +l 
  Zpz_sc00817.1.g00060.1.am.mk 254 KRAKRIIANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLT 299
                                   9****************************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-9250316IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.599252302IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.47E-10254301No hitNo description
PfamPF001701.6E-9254298IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-10254302No hitNo description
CDDcd147036.26E-23255302No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MRSPIDTGPR SSRPPVGGHM QVGVAPITSM GPTYPPPPSF SDPAQNRTRR HTPLSSSSPQ  60
CRYSAVSQTR AADSLTERRA RTCVWSAMAM PPKPGDPPQR SPGRSPNLNL PCPLPPIPGG  120
TPQQQPGGSG PPLPRAVHHR RARSEAAFRF PDDLGGGGGG SFDDGGSEDD LFSTFMDMDK  180
IAGADRDRAA ETSSPPRPAK HRHSASFDGF GMGGGVGGPG RQQDGAGGVF GEVMEAKKAM  240
SSEQLAELAA IDPKRAKRII ANRQSAARSK ERKARYITEL ERKVQTLQTE ATTLSAQLTL  300
FQLSEQQAVQ HHGNIQLPPH FQPPPNVPTH QMLSYPNSLP DMMQQDSLGR FQGLDIGKGP  360
VAVKSEAEVV VKSEGSSISA GAGLPARTET SHALLQVGRR QNGRLI
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00817.1.g00060.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799971.11e-139transcription factor RF2b-like
TrEMBLA0A2S3H5C01e-138A0A2S3H5C0_9POAL; Uncharacterized protein
TrEMBLA0A2T7F0531e-138A0A2T7F053_9POAL; Uncharacterized protein
STRINGPavir.Bb03755.1.p1e-137(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26833683
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.18e-33bZIP family protein