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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc00802.1.g00200.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
NAC |
Protein Properties |
Length: 492aa MW: 53081.5 Da PI: 9.2867 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00802.1.g00200.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 159.3 | 1.6e-49 | 142 | 267 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82
+pGfrFhPt+eel+ +yL++kveg+++++ + i+++d+y+++Pw+Lp+++ + kew+f+++rd+ky++g+r+nr+t+sgy
Zpz_sc00802.1.g00200.1.am.mk 142 MPGFRFHPTEEELIEFYLRRKVEGRRFNV-DLIADLDLYRFDPWELPAMAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGY 221
79***************************.99***************7767789*************************** PP
NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
Wkatg d+ + ++++ +glkktLvfy+g+apkg++++W+m+eyrl
Zpz_sc00802.1.g00200.1.am.mk 222 WKATGADRMIRGENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 267
********************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 492 aa
Download sequence Send
to blast |
MHVLTCQRAR RSSSEREAAE ASTDRRQEFG RGSRPKLDSS WLVSFASLNP TTPPSPSTRQ 60 GSSRHKQLRS CDSCAQNHST TCTAALDFSS ILRVRASYAM SRDLEDGHGG AVAAGGGAGS 120 SEASVGGGAG DGGDSHDNDL VMPGFRFHPT EEELIEFYLR RKVEGRRFNV DLIADLDLYR 180 FDPWELPAMA VMGGKEWFFY VPRDRKYRNG DRPNRVTASG YWKATGADRM IRGENNRPIG 240 LKKTLVFYSG KAPKGVRSSW IMNEYRLPPP AADADPLTHK SEISLCRVYK RSGIDDGHGQ 300 PSSSTQASSG RRTRTSRHMS TSPASTPLSH IQHPGSFHLL QGECSSVSPP TIMDPLLAAH 360 NVPQLLQPPR PRALTGNSLA AGASVPTEGA AILASTYSLL NMAAVPMGSS RPVDELSTLV 420 GHSQAYANHL SAATGSHFVL PLPLPQPTPQ VAPLGALPMA APPLASVADK LSWDWNPVPD 480 TTARDYSNSS FK
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-55 | 143 | 292 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-55 | 143 | 292 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-55 | 143 | 292 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-55 | 143 | 292 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swm_B | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swm_C | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swm_D | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swp_A | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swp_B | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swp_C | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
3swp_D | 7e-55 | 143 | 292 | 22 | 169 | NAC domain-containing protein 19 |
4dul_A | 6e-55 | 143 | 292 | 19 | 166 | NAC domain-containing protein 19 |
4dul_B | 6e-55 | 143 | 292 | 19 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT060478 | 0.0 | BT060478.1 Zea mays full-length cDNA clone ZM_BFb0004F04 mRNA, complete cds. |
GenBank | HQ858762 | 0.0 | HQ858762.1 Zea mays clone UT1609 NAC transcription factor mRNA, partial cds. |