PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00765.1.g00050.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 274aa    MW: 30342.3 Da    PI: 4.0801
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00765.1.g00050.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.11.7e-1043597128
                             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                                     ++ vg kktL+f++g+apkg +tdWvm ey++
  Zpz_sc00765.1.g00050.1.am.mkhc   4 SRIVGSKKTLIFHEGKAPKGDRTDWVMYEYKM 35 
                                     6789**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.073158IPR003441NAC domain
SuperFamilySSF1019411.27E-15358IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MLNSRIVGSK KTLIFHEGKA PKGDRTDWVM YEYKMEDDSL VSAGFSKDAY VICKIFKKSG  60
LGPRIGEQYG APFNEDEWEN AEAETSMFHL MPSSEVINPV EDLHVQQAIP AGTLEEPILQ  120
HSSAACAREE SSFDATANTC AEDMTFGNSV AGSDIHDGMV SENNVSNEFN NLCNPPEFDG  180
FLWEELSKFL NDSPNDNSFG GNSVLPPMSE AEAHAFEMNT LDLYNELSGL SGIGDVPNTY  240
RGDDGTMEHT TPPADRELSF DEYLELHKTN NFHM
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00765.1.g00050.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB3621601e-75AB362160.1 Oryza sativa Japonica Group mRNA for transcription factor, complete cds.
GenBankAK0650651e-75AK065065.1 Oryza sativa Japonica Group cDNA clone:J013001J20, full insert sequence.
GenBankAK0995401e-75AK099540.1 Oryza sativa Japonica Group cDNA clone:J013032G17, full insert sequence.
GenBankEU8469981e-75EU846998.1 Oryza sativa Japonica Group clone KCS104B01 NAM-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014660428.11e-126NAC domain-containing protein 82
TrEMBLA0A368QI291e-124A0A368QI29_SETIT; Uncharacterized protein
STRINGSb09g020880.21e-117(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-30NAC domain containing protein 2