PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00764.1.g00270.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 246aa MW: 27077.6 Da PI: 9.7611 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.7 | 3e-29 | 77 | 130 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k rlrWt eLHerFveav++L G+ekAtPk +l+lmkv+gLt++hvkSHLQ R Zpz_sc00764.1.g00270.1.sm.mk 77 KSRLRWTLELHERFVEAVNKLDGPEKATPKGVLKLMKVEGLTIYHVKSHLQVQR 130 68*************************************************877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.165 | 74 | 134 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.7E-15 | 75 | 132 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.3E-27 | 75 | 131 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.7E-23 | 77 | 131 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.0E-7 | 79 | 128 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 4.5E-9 | 125 | 153 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MEFQFLSEQL GIAITDNEES PRLDKHFFTD IYDTPPPQLS ALPVSSCSNQ SIQNPGSPVK 60 VQLNSSRSSS GSVATNKSRL RWTLELHERF VEAVNKLDGP EKATPKGVLK LMKVEGLTIY 120 HVKSHLQVQR QLQLRIEEHA KYLQKLLEEQ QKTGNTLPPK TLSKTQAESP ESVSKESGEP 180 EAGNSSPPSS KKRVPDVDME SNLLAGSKRT KVQVFKFEVI LQLGYGSSSP SGSVRTGAKA 240 RKGGDH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 2e-23 | 77 | 130 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-23 | 77 | 130 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-23 | 77 | 130 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-23 | 77 | 130 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q6YXZ4}. | |||||
UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00764.1.g00270.1.sm.mk |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025812859.1 | 1e-87 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Refseq | XP_025812860.1 | 1e-87 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Refseq | XP_025812862.1 | 1e-87 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Refseq | XP_025812863.1 | 1e-87 | protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Swissprot | A2X0Q0 | 5e-72 | PHR3_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 3 | ||||
Swissprot | Q6YXZ4 | 4e-72 | PHR3_ORYSJ; Protein PHOSPHATE STARVATION RESPONSE 3 | ||||
TrEMBL | A0A2S3HGL4 | 2e-86 | A0A2S3HGL4_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J27649.1.p | 8e-84 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4526 | 37 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13040.2 | 3e-45 | G2-like family protein |
Publications ? help Back to Top | |||
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