![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zpz_sc00735.1.g00260.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 521aa MW: 54496.8 Da PI: 8.8035 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.4 | 3.8e-39 | 63 | 124 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss Zpz_sc00735.1.g00260.1.am.mk 63 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 124 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-30 | 61 | 121 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.0E-33 | 65 | 121 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.059 | 67 | 121 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 69 | 105 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 521 aa Download sequence Send to blast |
MEEMLMAGNP NPNQNQNPAP AAPSAPPGGA QRTGVPAASA AAPAAGAGTD AGAGTERRAR 60 PQKEKALNCP RCNSTNTKFC YYNNYSLQQP RYFCKTCRRY WTEGGSLRNV PVGGGSRKNK 120 RSSSSVSVAA ATTSAAMSGT VPVGVGLAAA KNPKLMHEGA QDLNLAFPHH NGRGLQPPEF 180 AAFPSLESSS VCNPAGAAMA GTGAGGRGVG AFSAMELLRS TGYYVPLQHM QLGMPAEYTS 240 AGFALGELRM PPPPQSQSVL GFSLDTHGTG GVGGPGAYSA ALQDSAAGRL LFPFEDLKPA 300 VSAAGGGVSN TVGDHQYEHS KDQGGDGRAA SGVTGGHQTP GFWNNSMIGN ASSNGSGGGP 360 WIYDCDERRQ HCSGQDERAV VMHVPVRTTV MYSGEQLGAC NQEQRRRFFT VSQPHSCPAD 420 TAIPADPGPG SGKARDRAVS CFGKGLVEQR RRSWPHGETA ETAVQISGPP AQVSVCTAWA 480 LAGWSDGGRR CYRVAWVILF DFIRKEAAFV GNWWRQVSLP I |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Zpz_sc00735.1.g00260.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025826521.1 | 1e-152 | dof zinc finger protein 2-like isoform X2 | ||||
Swissprot | B9F1L8 | 1e-119 | DOF2_ORYSJ; Dof zinc finger protein 2 | ||||
TrEMBL | A0A3L6QBV6 | 1e-152 | A0A3L6QBV6_PANMI; Uncharacterized protein | ||||
STRING | Sb04g032040.1 | 1e-146 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2369 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24060.1 | 7e-43 | Dof family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|