PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00688.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Dof
Protein Properties Length: 335aa    MW: 35840.4 Da    PI: 11.5313
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00688.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof377e-121942173861
                        zf-Dof  38 ryWtkGGalrnvPvGggrrknkks 61 
                                   r+Wt+G +lrn+PvGgg+rknk++
  Zpz_sc00688.1.g00070.1.am.mk 194 RFWTHGSSLRNIPVGGGCRKNKSA 217
                                   9********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-5191215IPR003851Zinc finger, Dof-type
PfamPF027013.0E-6194216IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MDIIITSSSS KKANRTALAA HVLPTTTTSR LAQTQLMQPR RVWFPELTSE PVSARAPTPL  60
GLSQLIRAVR GRGGVVASQL RLAPLGHPQP IPRQRPVWAI KSDLLRGALG LPSSPRLSFA  120
PQLSSPLRSP PSAVGSQAIL CPLPRWFWPF AIRYTPAAPP GTVNLDDLDL LDFSEQQGHT  180
VNDFVDANRG ASIRFWTHGS SLRNIPVGGG CRKNKSASPL PLSTSSSINK LQNLLVPTSS  240
SIARATRLTP MCSKRLSPPA SKPPGVTCLP PLSSPILALA PLLDYNTGMM MSSFLDMLRG  300
GFLEHQGSGT EQPSSLDSVV SGSMGWLANM VVVQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00688.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4497022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.15e-07TARGET OF MONOPTEROS 6