PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00684.1.g00250.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 591aa MW: 63247.2 Da PI: 8.6903

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00684.1.g00250.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.6	3.6e-10	363	387	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWt eLH++Fv av++LGG++ Zpz_sc00684.1.g00250.1.am.mk 363 PRLRWTAELHHSFVGAVDSLGGPDS 387 8*********************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.4E-8	359	389	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence Send to blast
MCRRTEDEVD GDDSLCRPGD KERLSLTICA QAATMAIDAT AQGTALARER TRDPRLNMRD 60 TDDDASHRAS LLIPSTPEAS AGTCSSDLSQ LQEGETTASP ALIGFICVPE LALHFPGLRR 120 PVIATAPISW AGLSAVAPRE RDTKQQPIRE VAPRCGLRFE TRPRSLVQAD SPVKLWTDLT 180 AAPAQELSTG KWRIRRLWHC PCAAGAPFAE AFGSSSSDGW PSLRDLLGYD PVSQKGCHAG 240 RSAQNLPLPW ATTTPSCWVA GSRGEASPAG GRDRTRIAES PCPRVDARPA VRPHAHPVFV 300 QVQSSGEFTQ QATRLRGACC VASEAESKEG EVDQGLPAER AEGAMGGGRN GAVTRRYNRS 360 KVPRLRWTAE LHHSFVGAVD SLGGPDSTAK VGAEAAATHG SMQQRNSAMG APGTQHGSDD 420 CMQAMSMGRR RRMNQGLGLQ RDASTLQALG FWVRGSELFK VHQISRPVAN HISPVVGQLP 480 SKEISFESRG FLFRHEQAVK SSQSLSTLGP EAVEATTSWP SESSVVLSPP SSTSFGGRSG 540 APGCFFAMQR VNLEFSLQAA MAKITGCGRG SSTPKRAWPW KLCLKQQAAP A

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence Send to blast

MCRRTEDEVD GDDSLCRPGD KERLSLTICA QAATMAIDAT AQGTALARER TRDPRLNMRD  60
TDDDASHRAS LLIPSTPEAS AGTCSSDLSQ LQEGETTASP ALIGFICVPE LALHFPGLRR  120
PVIATAPISW AGLSAVAPRE RDTKQQPIRE VAPRCGLRFE TRPRSLVQAD SPVKLWTDLT  180
AAPAQELSTG KWRIRRLWHC PCAAGAPFAE AFGSSSSDGW PSLRDLLGYD PVSQKGCHAG  240
RSAQNLPLPW ATTTPSCWVA GSRGEASPAG GRDRTRIAES PCPRVDARPA VRPHAHPVFV  300
QVQSSGEFTQ QATRLRGACC VASEAESKEG EVDQGLPAER AEGAMGGGRN GAVTRRYNRS  360
KVPRLRWTAE LHHSFVGAVD SLGGPDSTAK VGAEAAATHG SMQQRNSAMG APGTQHGSDD  420
CMQAMSMGRR RRMNQGLGLQ RDASTLQALG FWVRGSELFK VHQISRPVAN HISPVVGQLP  480
SKEISFESRG FLFRHEQAVK SSQSLSTLGP EAVEATTSWP SESSVVLSPP SSTSFGGRSG  540
APGCFFAMQR VNLEFSLQAA MAKITGCGRG SSTPKRAWPW KLCLKQQAAP A

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00684.1.g00250.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	4e-08	G2-like family protein