PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zpz_sc00646.1.g00280.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

FAR1

Protein Properties

Length: 217aa MW: 24120.3 Da PI: 8.8514

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00646.1.g00280.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.3	1e-07	66	131	1	76
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76 ++Yn ++ e GF +r s+s+++ r++ + ++++vC +g + + + + r+gCk ++++++++d+ w Zpz_sc00646.1.g00280.1.sm.mk 66 NYYNLHSWEKGFGIRCSSSETN-RQQYVNMKELVCMYQGWPGANIRG---------SMRCGCKSRMVLRRTDDHGW 131 69**************9998.6666*********9998766.........99**********998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MVNHTTKVRP DAERQRGTCG PSERKPIVGR LTALEQALLD YKKKPGSCVI TPKEGVAFDS 60 YNEAFNYYNL HSWEKGFGIR CSSSETNRQQ YVNMKELVCM YQGWPGANIR GSMRCGCKSR 120 MVLRRTDDHG WLKPLCGAIA REVATDDIET NLYERSVGSV SAASLEPTRA EVMTAQGDHH 180 SFGRRWPSTT VPPWQIGATP LPPLGGGGGD IRYPHFS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00646.1.g00280.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP619	19	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	3e-09	FAR1-related sequence 6