 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc00632.1.g00040.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
TCP |
| Protein Properties |
Length: 193aa MW: 20307.1 Da PI: 10.5254 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00632.1.g00040.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 109.6 | 4.7e-34 | 41 | 123 | 3 | 92 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssa 82
+k + ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++s+a +c ss s+
Zpz_sc00632.1.g00040.1.sm.mk 41 KKPSGSKDRHSKVNGRGRRVRVPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTSPAvFSC---SSAPST 118
5666789********************************************************999995444...222222 PP
TCP 83 snsssgkaak 92
s+s ++
Zpz_sc00632.1.g00040.1.sm.mk 119 SSS-----SR 123
211.....11 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MASREHAAAT FHQVYQPTPA PMSLAALAPT DAAVAMAPAR KKPSGSKDRH SKVNGRGRRV 60
RVPIVCAARV FQLTRELGLK SDGQTVEWLL RQAEPSILAA TGSGTSPAVF SCSSAPSTSS 120
SSRSLLLGKR PRQDVDEAPP PLWAAMQARP VGVAWGLSTP AQEQAYASAA QGHCLNLLSV 180
LSGTTKPAEE ESR
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU967480 | 7e-77 | EU967480.1 Zea mays clone 303582 TCP-domain protein mRNA, complete cds. |
