PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00526.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 475aa    MW: 52027.5 Da    PI: 10.2091
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00526.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.64.1e-221612925128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..at 78 
                                   f+ +P+d el+  yL++ ve+       +i+++d+y  eP +L +     + + +e+ wyf ++ ++k++ gkrk+r  at
  Zpz_sc00526.1.g00040.1.am.mk 161 FHTQPSDLELLRSYLRPWVESGLKAG-AFIHDADVYADEPARLTEtfapaASQDGERAWYFLTPLHRKSEGGKRKSRtvAT 240
                                   5668***************9988555.78**************74467755566888********************7668 PP

                           NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    +g W++  k+k+v++   ++++vg ++++ f k++ +   +t W+m e rl
  Zpz_sc00526.1.g00040.1.am.mk 241 GEGWWHNEAKSKPVVDGldGRRHVGYRQSFSFMKKEGSLRIRTGWLMLELRL 292
                                   89*************98888899**********9999999*******99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100532.2157311IPR003441NAC domain
PfamPF023651.2E-12161292IPR003441NAC domain
SuperFamilySSF1019415.89E-29161311IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MLRVWYGGCA DGEIERFIRL KLPASTTVSL IHSPIGPGYT RTSAALPLDK RPAAFPQKPE  60
RRTNLARPLG ASPFNSNRPS PAAQESVARR NPTRIGSPRV TVSVTPRRRV RFGIGSFLRL  120
FGYARPPPPL GRPLSVSVYM VRSPTTPPPT PNGKPAPNAP FHTQPSDLEL LRSYLRPWVE  180
SGLKAGAFIH DADVYADEPA RLTETFAPAA SQDGERAWYF LTPLHRKSEG GKRKSRTVAT  240
GEGWWHNEAK SKPVVDGLDG RRHVGYRQSF SFMKKEGSLR IRTGWLMLEL RLGDAADPRE  300
GGLVLCKVYR SPRHPGTITC PAARDQLPRP ERKTNDDERS DAAAGRSQFD GEGSNAATPR  360
ITYEAIPDTA AAAARGRKEK AADDNDDSDE TWLNSPDSKR KAANDETSVA ASAAEHAQSK  420
RKTEGGLHYC PQCGFHLDAV MAAVNAKSSE TKSEVGIVQV QGDSLVKDHS FHQFI
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00526.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.22e-79protein ATAF2
TrEMBLA0A368R9324e-78A0A368R932_SETIT; Uncharacterized protein
TrEMBLK3XIX72e-78K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m4e-79(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-18NAC domain containing protein 47