PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00429.1.g00270.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 86aa    MW: 9779.78 Da    PI: 8.7106
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00429.1.g00270.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY27.94.7e-094060222
                                    --SS-EEEEEEE--TT-SS-E CS
                            WRKY  2 dDgynWrKYGqKevkgsefpr 22
                                    dDg++WrKYG K+  +s+fpr
  Zpz_sc00429.1.g00270.1.sm.mkhc 40 DDGHQWRKYGEKKLSNSNFPR 60
                                    8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-82861IPR003657WRKY domain
SuperFamilySSF1182907.72E-93264IPR003657WRKY domain
SMARTSM007748.4E-53981IPR003657WRKY domain
PfamPF031068.0E-74061IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MALDSVPLYP GGDLGSGSRA TSRAHHQRIS WTADTYAPYD DGHQWRKYGE KKLSNSNFPR  60
FCPSQMHIQE RNEVCRYKAS PAEGHQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00429.1.g00270.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172253.15e-25WRKY transcription factor 55-like
TrEMBLA0A3B6IP021e-23A0A3B6IP02_WHEAT; Uncharacterized protein
TrEMBLA0A446R2R11e-23A0A446R2R1_TRITD; Uncharacterized protein
TrEMBLA0A446RY791e-23A0A446RY79_TRITD; Uncharacterized protein
TrEMBLA0A453HPE71e-23A0A453HPE7_AEGTS; Uncharacterized protein
TrEMBLM8CYI11e-23M8CYI1_AEGTA; WRKY transcription factor 55
TrEMBLW5DRW61e-23W5DRW6_WHEAT; Uncharacterized protein
STRINGEMT289362e-24(Aegilops tauschii)
STRINGMLOC_34522.12e-24(Hordeum vulgare)
STRINGTraes_4AL_9E0D1CFA6.12e-24(Triticum aestivum)
STRINGTraes_4BS_A6D9EB0E5.15e-24(Triticum aestivum)
STRINGTraes_4DS_FE38A59D0.12e-24(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-07WRKY DNA-binding protein 55