 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc00425.1.g00380.1.am.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
Trihelix |
| Protein Properties |
Length: 175aa MW: 19915.9 Da PI: 5.329 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00425.1.g00380.1.am.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 55 | 2.1e-17 | 31 | 95 | 1 | 55 |
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwe 55
+Wt+++v++Li+a+++++e+++++ +kk++W+++sk+m erg+++sp+qC++k +
Zpz_sc00425.1.g00380.1.am.mkhc 31 KWTDSMVKLLITAVSYTGEDYGADLgggrrnfsimQKKGKWKAISKVMGERGCHVSPQQCEDKCK 95
7*********************9744455677788***************************965 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MSDDEEHELT EDANENPSGK GKKSSAWHRM KWTDSMVKLL ITAVSYTGED YGADLGGGRR 60
NFSIMQKKGK WKAISKVMGE RGCHVSPQQC EDKCKEDHDS RRDVFGDGDE DDQSADSDYY 120
EDDEEHHAVH TNMREPSMLK RMRHSDMALV NSSPHEGSAR NLFCIRMRFA GDLVQ
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT1G21200.1 | 2e-29 | sequence-specific DNA binding transcription factors |
