PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00425.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 430aa    MW: 45577.3 Da    PI: 9.9197
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00425.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.66.4e-09117165149
                                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                                   eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk l
  Zpz_sc00425.1.g00050.1.am.mk 117 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKVL 165
                                   89********************************************866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.3E-6114163No hitNo description
SMARTSM003380.0019117168IPR004827Basic-leucine zipper domain
PfamPF001709.7E-8117164IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531119163IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.05E-5121163No hitNo description
CDDcd147022.96E-11122163No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MSDDSDEQRQ CRRGVGVHEL DAAMALADLA GVSPEPQKLH PQPATRAAAA EREEDEELAS  60
TGLSLELGKV GIHSSSPCSS TSSAGHHRHH PAQQQQVQAP VSVYGPRPRH NMLTEAEKEA  120
KRLRRVLANR ESARQTILRR QAIRDELARK VADLSSQNES MKKVLLSSHY VLPSRRVTGL  180
SPDGAALLRC RRRTWRTYRP VATAVHLVST ASVELRIARV RSSSGAISAE SLRVARTTKK  240
APAAAPPSQH AVAPSAASPQ TTPPQPSFLS TVAPPTVLVP YVWGSWPPTT GHEHAGSPLA  300
PAPLRLAPCA WYYPAAAVEP TSGGGSPAGA ETADEDTDDD PCSLTLAIDL DKRSAPIAIG  360
SSRAAEAGQQ VGTERDKAVT TAEARKRRKE LTKLKHMHAT AGRPGPVTGG IAGDGGDSTI  420
AFSVVAMATR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1384389RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00425.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2457503e-50DQ245750.1 Zea mays clone 20079 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK3ZIQ02e-74K3ZIQ0_SETIT; Uncharacterized protein
STRINGSi026452m3e-75(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-09bZIP family protein