PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00423.1.g00350.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 98aa    MW: 9926.61 Da    PI: 4.2909
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00423.1.g00350.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like414.1e-135292751
                       G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51
                                  AtPk++lelm+vk+Ltl+hvkSHLQ
  Zpz_sc00423.1.g00350.1.am.mk  5 ATPKSVLELMDVKDLTLAHVKSHLQ 29
                                  9************************ PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015576.4E-9429IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.605.6E-11529IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MLAGATPKSV LELMDVKDLT LAHVKSHLQA RPIDGGGSGD EDLQNAEQAQ SAGDINRQPF  60
AAHQSASSEG ATSQAGGGDL ECSSADDSDG SRARSTSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00423.1.g00350.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015696540.13e-23PREDICTED: probable transcription factor RL9
TrEMBLA0A3L6RKZ85e-22A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p9e-28(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3364634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.29e-12G2-like family protein