PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00388.1.g00170.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15528.5 Da PI: 5.9781 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.6 | 1.3e-15 | 12 | 136 | 2 | 125 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptd+el+++yL ++ gk+ +l+++ +++ ++ +++P++L +++ +++ ++f+++ ++ a r+ + Zpz_sc00388.1.g00170.1.sm.mk 12 PPGLIFDPTDKELIWHYLLPQSLGKPETLSSFvVEDNKVANTQPRKLFQNHGLSDNlPTFFYVCDERPDA--CRNCLCDGN 90 8*************************88877658888**********75555555547799999888654..58888889* PP NAM 81 gyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125 g Wk + d +vl ++++ ++++ L f + + +Wvmhe Zpz_sc00388.1.g00170.1.sm.mk 91 GLWKIQKCeskdDPHVLIVgGTNVRWTRNNLNFNLD---S-GSFSWVMHE 136 ****5543111133444445777899*******832...3.3679****8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-19 | 7 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 17.688 | 11 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-11 | 12 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MSAAKFFSDN HPPGLIFDPT DKELIWHYLL PQSLGKPETL SSFVVEDNKV ANTQPRKLFQ 60 NHGLSDNLPT FFYVCDERPD ACRNCLCDGN GLWKIQKCES KDDPHVLIVG GTNVRWTRNN 120 LNFNLDSGSF SWVMHE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00388.1.g00170.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |