PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00385.1.g00150.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 276aa MW: 29380.1 Da PI: 7.203 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 40 | 8.8e-13 | 27 | 53 | 2 | 28 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAt 28 prlrWtp+LH++Fv+a+++LGG++++t Zpz_sc00385.1.g00150.1.am.mk 27 PRLRWTPDLHHCFVHAIHKLGGQDRTT 53 8************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.6E-10 | 23 | 53 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MTMARRTAVA GKERNGGVRQ YNRSNVPRLR WTPDLHHCFV HAIHKLGGQD RTTMQGHHPA 60 VDQGHVHGGM ELRTDTPLQR DHERDAPSPS CHAPKPGKGP MLLSRLKRDF TPSGEGEDEI 120 GSTRPMGLLR GQGIWESDRS WSLYCALAAA GGYHSSMLAP LQMQAAAAMA MSMALPPPPH 180 AEVEPPACFR DHSFEMLATA PAHGVAGTTT NGLLQAVTTD APRKAQSPPP VDDGCSLSLS 240 LALVADTAGS SSGEEGSLLS WTTCSSGSRI SLDLSL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00385.1.g00150.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC215820 | 1e-35 | AC215820.3 Oryza punctata clone OP__Ba0049E12, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025792174.1 | 2e-44 | uncharacterized protein LOC112873442 | ||||
TrEMBL | A0A3L6TRH3 | 8e-45 | A0A3L6TRH3_PANMI; Uncharacterized protein | ||||
STRING | Si036127m | 2e-43 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7610 | 29 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 1e-12 | G2-like family protein |