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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc00379.1.g00160.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 369aa MW: 40499.6 Da PI: 8.0818 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00379.1.g00160.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 68.4 | 1.1e-21 | 110 | 171 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS.TTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed.pkvveitYegeHnhe 59
+Dgy WrKYGqK +++++fprsY+rC+++ gCp+ k+v+r ++d p +++Y eH+++
Zpz_sc00379.1.g00160.1.sm.mkhc 110 SDGYLWRKYGQKRITNKDFPRSYFRCSHHrkrGCPAMKQVQRHSHDePPQYVVVYVHEHTCD 171
6***************************99999*********87652678999******996 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MQAHSRFAAS SSVSADEHEA LIRELTRGHE LTARLWAEAP RALRGQGQAE DAAAFILQEV 60
SRAFTVCISI MRSPPPSRAP PPPPPTEAAT RRFRDENAPR REVVTYAPDS DGYLWRKYGQ 120
KRITNKDFPR SYFRCSHHRK RGCPAMKQVQ RHSHDEPPQY VVVYVHEHTC DTTVWEPEVT 180
PSPAPAGATT SPLPLPADYL PGLASQQRGV AQAEQERQAM VSTLAVVLGA HSPAGSGSRV 240
AAFEREPQQQ QHGASASVVD PSVVGGGDEL PRLDVDAELD VMDYDVTGAM YLGDSYGLPD 300
DDGLDLLSIR VRAVARAAAC WCWKATVTSG TPASRPRRRV DVTRVRVRRR CPYPARSFLL 360
LGSMAMSAD
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT063861 | 5e-61 | BT063861.1 Zea mays full-length cDNA clone ZM_BFc0113G18 mRNA, complete cds. |
| GenBank | EU956487 | 5e-61 | EU956487.1 Zea mays clone 1564344 WRKY DNA binding domain containing protein mRNA, complete cds. |
| GenBank | JX469948 | 5e-61 | JX469948.1 Zea mays subsp. mays clone UT3209 WRKY-type transcription factor mRNA, partial cds. |
