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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00365.1.g00300.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 661aa MW: 72551.4 Da PI: 9.0486 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.5 | 8.1e-10 | 434 | 486 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr +r NR +A rs +RK +++eLe+kv+ L++e ++L +l l+ +a Zpz_sc00365.1.g00300.1.am.mk 434 KRVKRVLANRQSAARSKERKMRYMAELEQKVQILQTEATTLSAQLTLLQRDSA 486 999*****************************************999987766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-16 | 430 | 494 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 432 | 495 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.6E-9 | 434 | 486 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-11 | 434 | 484 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-9 | 434 | 486 | No hit | No description |
CDD | cd14703 | 2.72E-22 | 435 | 486 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 661 aa Download sequence Send to blast |
MQQQQWHMPY HEDALLRPGS SGSARARPSL QKRRRDRHHI ITATDGPDHL HSMCLHDCVG 60 PTRFLAGRKP FFSQPLPSAP PPSSSSLCLS FVFQSTRVAP QGACGTEQGR KQTGCRRAEA 120 TEAVRAVDRQ TEGQPNGALK APARAKHRSI RFHRRPPRLH RQRQRSNGTS PPPPWSFRAT 180 MNGAADAHAA SLMQQELLQA ARLQQQPPQG MTSSMPTSNK PRLPGLPPTP PQRALDACMD 240 VDPAARNTAH RRSRSDVPFD YFPPPKVEAG WGGGHDDADE LFDSYLNLDG LDGVNNSSEE 300 RRDDGDSRGS SMKTNGADSS ENESEEGAAA DSRAAGIRLW AADGVEGLNH RGGPGGQPGA 360 APAPRHARSL SMDSLIGNGK FNCAAGGMTS GANAIMPGPN RFSLEFGSGE FTPAEMKKIM 420 ADEKLAEMAL ADPKRVKRVL ANRQSAARSK ERKMRYMAEL EQKVQILQTE ATTLSAQLTL 480 LQRDSAGIAT QNSELQFRIR AMEQQAQLRD AVFVNVRCAK HERRLAVVLD TCSLEKLYPA 540 AGVDDDMLAC PRPVRGGRMQ VGSWWRLAFR EYTIASCANT GSPLNEALTA EVQRLKLATA 600 ELGDSCSSNN LVQQIQLNVQ EQMFQLQQQQ QQQQQQATPI PFYQLQHPQQ SGAPENHEFK 660 E |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00365.1.g00300.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF121098 | 1e-133 | EF121098.2 Zoysia japonica clone GB-ZJM-129 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025796879.1 | 1e-136 | transcription factor RF2b-like | ||||
TrEMBL | A0A2T7CI88 | 1e-137 | A0A2T7CI88_9POAL; Uncharacterized protein | ||||
STRING | Si035841m | 1e-128 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3536 | 35 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 7e-42 | bZIP family protein |