 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc00341.1.g00090.1.am.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
NAC |
| Protein Properties |
Length: 266aa MW: 29140.9 Da PI: 9.1362 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00341.1.g00090.1.am.mkhc | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 105.7 | 5.7e-33 | 61 | 182 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lp GfrF+Ptdeel+ +yL++k+ + +l++ ++i+ +d+ +++PwdL ++e +fF+ ++++ +r ra+
Zpz_sc00341.1.g00090.1.am.mkhc 61 LPIGFRFRPTDEELLLHYLRRKALACPLPA-DIIPVADLARLHPWDLV-PPGDADEERFFFHLPETRHW--RRGGRAAG 135
699***************************.99**************4.34456789999999988765..6999**** PP
NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+W+a+gk+k v+s ++ vg k+tLvf ++ g++tdWvmheyrl
Zpz_sc00341.1.g00090.1.am.mkhc 136 TGVWRASGKEKLVVSPrCKRPVGAKRTLVFC---HRGGKRTDWVMHEYRL 182
**************9877889*********9...677889********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
RSIEAARGAE EIHRSQQIRS LLPPSVSESI GWDLVRASLA MEARRPRQAG GGGGRVGLAG 60
LPIGFRFRPT DEELLLHYLR RKALACPLPA DIIPVADLAR LHPWDLVPPG DADEERFFFH 120
LPETRHWRRG GRAAGTGVWR ASGKEKLVVS PRCKRPVGAK RTLVFCHRGG KRTDWVMHEY 180
RLLPAGLLVH NPSSGPHVTS CHGAAAGAED WVVCRIFKRT KPGNGGRGRE EEAEEIPSSP 240
SSCVTDNSSH SDHEEGEQSS SGDSRV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-26 | 61 | 219 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-26 | 61 | 219 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-26 | 61 | 219 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-26 | 61 | 219 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 3e-26 | 61 | 219 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 3e-26 | 61 | 219 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 3e-26 | 61 | 219 | 17 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP094930 | 2e-94 | FP094930.1 Phyllostachys edulis cDNA clone: bphylf042n13, full insert sequence. |
