PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00330.1.g00200.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 393aa    MW: 42805 Da    PI: 10.6122
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00330.1.g00200.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.91.1e-09282300321
                                     -SS-EEEEEEE--TT-SS- CS
                            WRKY   3 DgynWrKYGqKevkgsefp 21 
                                     D+y+WrKYGqK++kgs++p
  Zpz_sc00330.1.g00200.1.sm.mkhc 282 DEYSWRKYGQKPIKGSPHP 300
                                     9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.4E-17232278IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-9268316IPR003657WRKY domain
PROSITE profilePS5081111.176275300IPR003657WRKY domain
SuperFamilySSF1182907.59E-7278301IPR003657WRKY domain
SMARTSM007740.0014280322IPR003657WRKY domain
PfamPF031069.7E-6282301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MEEVEEANRA AVESCHRVLA LLAQPQDPAQ LRSVAKGTDE ACAKFRKVVS LLSNGGVGEA  60
GTSGGSGSHP KAKIASRRHN PGFFTKKSFL DSNTPVVVLN SAQPSPSSAQ VYPRNGAWDA  120
QSVNPLGGPP KMVQPLSAHF QFGNVSSRYH FHNQQQQKQK LQAEMFKRSN SGINLKFDST  180
SGTGTMSSAR SSFLSSLSMD GSVASLDGKS STFHLIGGPA MSDPVNAQQA PRRHCTGHGE  240
DGTGKCAVTG RCHCSKRSRK LRVKRSIKVP AISNKIADIP PDEYSWRKYG QKPIKGSPHP  300
SESEVHRQGE ISRWPRRAYL TSRASTSTTT TVGAAYLARR RRRSDGRDLD CNDDSGWKVN  360
GFFWRWAMRN LLHARFGGDL ELLERSDADS ALA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00330.1.g00200.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025795417.10.0protein WRKY1-like isoform X1
TrEMBLA0A2S3IK150.0A0A2S3IK15_9POAL; Uncharacterized protein
TrEMBLA0A2T7C3I70.0A0A2T7C3I7_9POAL; Uncharacterized protein
STRINGPavir.Ia01239.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28593887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.22e-28WRKY DNA-binding protein 39