PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00314.1.g00430.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 416aa    MW: 45371.2 Da    PI: 8.3484
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00314.1.g00430.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2224.3e-07177199223
                                   EETTTTEEESSHHHHHHHHHH.T CS
                       zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                   +CpdCg+ F r+++L+ H++  H
  Zpz_sc00314.1.g00430.1.sm.mk 177 PCPDCGEIFVRQESLQMHQSIrH 199
                                   7******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.603.6E-4175195IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS501579.141176200IPR007087Zinc finger, C2H2
PROSITE patternPS000280176199IPR007087Zinc finger, C2H2
SuperFamilySSF563995.95E-17201415No hitNo description
Gene3DG3DSA:3.90.228.101.7E-11204415IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MVEPAAARNS TATKKSKVKQ RQCTEPPPES PSHRLVALKS LFSCRNSHGH APDSSCKGTS  60
SKKQQLACSS APSICHQLKD NEQVKVKPPT DAAGDPCKRR ASVSGSSERR VKKPLSEVSD  120
NKLRQGGGGS SSSSSTGGGS FRAGMQLRRL SGCYECHMVV DPIFRDSSSM RATTICPCPD  180
CGEIFVRQES LQMHQSIRHA VCELGSDDTS RNIIEIIFQS SWLKKQSPVC RVERILKVHN  240
SARTLARFED YREAVKAKAK KKHHPRCTAD GNELLRFHCA ALGCALGLHG ATHLCGACPT  300
CAIIRDGFFD NSDGIRTMAT SGRAHDAAVP EAGTTEERSR AMLVCRVIAG RVKRPSNHHD  360
DDQQQEQEEV RAEADGEEEE EYESVAGSAG VYSNMEELLV FNSKAILPCF VVIYKA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00314.1.g00430.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025824982.11e-165uncharacterized protein LOC112900370
TrEMBLA0A2S3IBV11e-163A0A2S3IBV1_9POAL; Uncharacterized protein
STRINGGRMZM2G136494_P011e-162(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26333880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-71C2H2-like zinc finger protein