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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc00304.1.g00500.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 23594.3 Da PI: 4.8047 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00304.1.g00500.1.sm.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.2 | 8.6e-18 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f+ +e+Aa+a++ a+ +++g
Zpz_sc00304.1.g00500.1.sm.mk 40 TYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFDNPEMAARAHDVAAVAIKG 89
69****998.**********843...6*********************998876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MSHGTTCSSN SSSSGSLNAP SSPSSSCSKK RPRRDLKHPT YRGVRMRTWG KWVSEIREPR 60 KKSRIWLGTF DNPEMAARAH DVAAVAIKGR AAHLNFPELA HELPRAASAA PKDVQAAAAL 120 AAATVVDSPD PPPCHDADED EEELAAEQAT PDCGIASSNA PLSGGDVGLD CTFFDVPDAL 180 LDFGFMFSPP PMPSYCGSPW DDIPDDFCCF QEPLLLWEH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727864 | 1e-124 | KJ727864.1 Zea mays clone pUT5956 AP2-EREBP transcription factor (EREB185) gene, partial cds. |