PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00244.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 357aa    MW: 39264.4 Da    PI: 6.6368
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00244.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.77.5e-21191251158
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   ++Dg+ WrKYGqKe+ +se+p  Y+r  ++   gC++k++v++s+ dp+v  itY geH++
  Zpz_sc00244.1.g00030.1.am.mk 191 MNDGFIWRKYGQKEICDSEYPMLYFRRIHKddrGCTAKRQVQQSSADPSVYLITYFGEHTC 251
                                   58*************************9998999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-20184251IPR003657WRKY domain
PROSITE profilePS5081117.936186249IPR003657WRKY domain
SuperFamilySSF1182902.35E-18187252IPR003657WRKY domain
SMARTSM007741.4E-28191253IPR003657WRKY domain
PfamPF031066.7E-20192251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MWCMWGWSSI PHRVNRTAGE EIAGFNLKLA GRCQWIEILG VRLPRQSSPT SRIARSTSGR  60
TRCPCGRLRQ NLPAMGLLST WTRPGRPAAC AASELVTKGR ESAAVLQALL GHPQQAVAAD  120
ELPDGLLDLT EQILRCCDRA LAAQRSGTED CAGGDRKGAL AGAPPPATNS KRKRQVSGEE  180
KGRRVEKQRT MNDGFIWRKY GQKEICDSEY PMLYFRRIHK DDRGCTAKRQ VQQSSADPSV  240
YLITYFGEHT CCRHDVEPPA PFMVNFACRA SYDDVDGGLA VNETTDLCNS PGELLLAGTG  300
DMAELSKLQS APALEEAGKS SPEWDPLRGC LDWDLADDDI SFNTGQFIDV DYLSLLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-19189251668OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00244.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809070.11e-74probable WRKY transcription factor 70
TrEMBLA0A2T7ECG01e-76A0A2T7ECG0_9POAL; Uncharacterized protein
STRINGPavir.J07662.1.p3e-78(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-19WRKY DNA-binding protein 70