PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00244.1.g00020.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 249aa    MW: 27343.2 Da    PI: 6.1711
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00244.1.g00020.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.67.1e-20132194259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST....T---EEEEEE.-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa....gCpvkkkver.saedpkvveitYegeHnhe 59 
                                   +Dg++WrKYG K++ + +++r YY+C  +    +Cp+kk v++ s+++p ++++t+ +eH+++
  Zpz_sc00244.1.g00020.1.sm.mk 132 NDGFSWRKYGEKKILNDPYTRMYYKCGNSdshsKCPAKKYVQQqSNSEPPLFTVTFINEHTCS 194
                                   7*************************6544455********872567999***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-22118194IPR003657WRKY domain
PROSITE profilePS5081115.847126196IPR003657WRKY domain
SuperFamilySSF1182901.96E-19127194IPR003657WRKY domain
SMARTSM007741.7E-23131195IPR003657WRKY domain
PfamPF031063.8E-21132193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MPKSEGMSPS SSQPPSNWRK AAIQELSRGT ELAARLRQQV ELIPELDRRE AVVANVSEIS  60
EAMEASLSIL QSESEHSSSE ALQAGCAAYS SDGGSEPRHG AAARGRKVKH RRGRLGEEST  120
VIKEIQTDSP DNDGFSWRKY GEKKILNDPY TRMYYKCGNS DSHSKCPAKK YVQQQSNSEP  180
PLFTVTFINE HTCSTAFPDE PSSSSDSSHV IDFTKPSSLS PPLMEGASGP GVKQEEEAMT  240
SVFAHRWAY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00244.1.g00020.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808777.11e-80probable WRKY transcription factor 62
TrEMBLA0A2T7ECG88e-80A0A2T7ECG8_9POAL; Uncharacterized protein
STRINGSi022933m2e-75(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.19e-18WRKY DNA-binding protein 55