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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc00237.1.g00090.1.sm.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 328aa MW: 35725.6 Da PI: 5.1638 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00237.1.g00090.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 109 | 158 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++G+r+++ +g+W+AeIrdp + +r++lg+f tae+Aa+a++ +++l+g
Zpz_sc00237.1.g00090.1.sm.mkhc 109 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFNTAEDAARAYDVEARRLRG 158
69*******.**********72....35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0034059 | Biological Process | response to anoxia |
GO:0071456 | Biological Process | cellular response to hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MCGGAILAEL IPPTRRAASR PVTAGGNLWP ASSENGGRGR DNKKHVAEID DFEAAFDEFD 60 DDFDEVEEDG DYGYDGSRAR PFVFASKPAF SSAHDGRAAR QRKRGSRRHF RGIRQRPWGK 120 WAAEIRDPHK GTRVWLGTFN TAEDAARAYD VEARRLRGSK AKVNFPAAGA MPRRAKARPA 180 PKAQPPPAAA QLASLGGQKK KQEELVAEPE TMMAAFNMDN LLDLTFPAAP PVTASSFTDS 240 ARSESGAPVK KQRTDHSSDG SATLELTDEL EFDPFMFFQL PYMDGGYESI DSLFAGGEAG 300 QDVNTVNSDM NGAGLWSFDE FPIDGAIF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269|PubMed:12913152}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT034434 | 3e-81 | BT034434.1 Zea mays full-length cDNA clone ZM_BFc0170J03 mRNA, complete cds. |
GenBank | BT039300 | 3e-81 | BT039300.1 Zea mays full-length cDNA clone ZM_BFc0004M21 mRNA, complete cds. |
GenBank | BT063174 | 3e-81 | BT063174.1 Zea mays full-length cDNA clone ZM_BFc0035E09 mRNA, complete cds. |
GenBank | EU941438 | 3e-81 | EU941438.1 Zea mays clone 1452173 mRNA sequence. |
GenBank | EU970244 | 3e-81 | EU970244.1 Zea mays clone 342610 root abundant factor mRNA, complete cds. |
GenBank | KJ726938 | 3e-81 | KJ726938.1 Zea mays clone pUT3484 AP2-EREBP transcription factor (EREB180) mRNA, partial cds. |
Publications
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- Kim CY, et al.
Identification of rice blast fungal elicitor-responsive genes by differential display analysis. Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4 [PMID:10755311] - Koo SC, et al.
OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33. Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70 [PMID:19607808] - Iwamoto M,Takano M
Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice. Biotechnol. Lett., 2011. 33(1): p. 173-8 [PMID:20872166] - Serra TS, et al.
OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors. Plant Mol. Biol., 2013. 82(4-5): p. 439-55 [PMID:23703395] - Jisha V, et al.
Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice. PLoS ONE, 2015. 10(6): p. e0127831 [PMID:26035591] - Lourenço TF, et al.
The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors. Plant Physiol., 2015. 169(3): p. 2275-87 [PMID:26381316]
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