PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00216.1.g00130.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 412aa    MW: 43672.8 Da    PI: 7.9434
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00216.1.g00130.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.71.1e-082552862758
                                   E-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY  27 CtsagCpvkkkversaedpkvveitYegeHnh 58 
                                    t+ gC++kkkv+r ++dp + e+tY g+H++
  Zpz_sc00216.1.g00130.1.am.mk 255 QTYYGCEAKKKVQRLDDDPFTYEVTYCGNHTC 286
                                   5888**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-7253286IPR003657WRKY domain
PfamPF031061.8E-7255286IPR003657WRKY domain
SuperFamilySSF1182902.22E-7256286IPR003657WRKY domain
SMARTSM007743.1E-5256288IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MQVLAGHPHP QHPFTLDHLR GSVNINQKIT GDELLGQLGA MDDVLSQIHQ AFQLASQLMQ  60
ELSGGQNDPA YLAERCHGIA RAYAAAIRML QPHGRTEVGA TQLLPPSASD LLRQWRPDHR  120
EAGGTVANNP FLGSPPSAQL GHLLEPSSFH TLAEAFSATR AHEMVRTGAD VAGTSGGPVR  180
RVAPSSRGSP PIQPRQGRRR YVPCHFLAYV RGERGQADGD GPGASCRRRH RSATGRRVHV  240
AQVWTEGYPR LSVSQTYYGC EAKKKVQRLD DDPFTYEVTY CGNHTCLTST TPLLTLPATA  300
TTDTVTTNSP TSSGAILAQD LAVVTAERHP APALSTAIQL GMSSMPSSLV GASSSAGGGG  360
EGNGAPANVP ISGTGREMEY PVMDLADAMF NSGSSGGSSM DAIFSSPRPR DR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00216.1.g00130.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1362243e-48AC136224.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0006B22, complete sequence.
GenBankAC1362273e-48AC136227.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0109A13, complete sequence.
GenBankAK2878173e-48AK287817.1 Oryza sativa Japonica Group cDNA, clone: J065181J09, full insert sequence.
GenBankAP0149613e-48AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.
GenBankCP0126133e-48CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681211.12e-76probable WRKY transcription factor 53
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.28e-08WRKY DNA-binding protein 55