PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00208.1.g00420.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 651aa    MW: 71423.4 Da    PI: 7.5014
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00208.1.g00420.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.39.7e-26141202159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ++Dg++WrKYGqKe+++s+fpr Y+rCt++   gC ++++v++s+ dp++  itY geH+++
  Zpz_sc00208.1.g00420.1.am.mk 141 MEDGHAWRKYGQKEIRDSKFPRLYFRCTYKedrGCLARRRVQQSDADPSLYLITYFGEHTCS 202
                                   58***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031066.3E-8241IPR003657WRKY domain
SuperFamilySSF1182904.71E-6242IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-6242IPR003657WRKY domain
SMARTSM007741.4E-4243IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-24134202IPR003657WRKY domain
PROSITE profilePS5081120.713136204IPR003657WRKY domain
SuperFamilySSF1182901.07E-23137203IPR003657WRKY domain
SMARTSM007746.8E-38141203IPR003657WRKY domain
PfamPF031062.8E-24142201IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    Send to blast
MYYKCGNSDS HSKCPAKKYV QQQSNSEPPL FTVTFINEHT CSTAFPDEPS SSSDSSHVID  60
FTKPSSLSPP LMEGATGPGV KQEEEAMTSD KQTTSQQVNE FHPNGLQLYK PEEHVMDAPR  120
SKRMRVSDGE RGTTVEKKWT MEDGHAWRKY GQKEIRDSKF PRLYFRCTYK EDRGCLARRR  180
VQQSDADPSL YLITYFGEHT CSCSRDTDEP PAPLVINFSS GRTRDGQLPS GCSPWPSCDD  240
DGLVVSETSS EICGLSEGDD LRPDKDNVAE RTEHSAPVPP PKPEGMSLPE WEPLDGFLDW  300
ELWDDQISHC RPDLIFQCPF RRRARRPMGA RGARSAAECS EAADARHDDV RSLTPEHHHD  360
VSMRSGWECG EVTRPSDLVV AARNLPDGAL CYVSSSPRFR FGRARLGSSD GGGAALEPGQ  420
GAARPWSRGG DGAARELIWG CAAWALGWGG GVDAAMESSP ARANTARPLG RASKRRSPTQ  480
HPWPVASRGR AGEERGEGTT GWRWVGRGVK TALHPLKRST PRSMSTRAKS ARVSPQPPSP  540
PAPSNQRDAA IQELRRGSQL AAMLRQQLEL IPEVDRREAA AASMSEIAEA MDSSLSILQS  600
ESEHSSSQAG AMAMPSPADL SSDVSTGTRR AAVPRARKVR HRRGRLGELP V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-21141201868OsWRKY45
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00208.1.g00420.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.11e-21WRKY DNA-binding protein 54