PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00208.1.g00410.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 271aa MW: 30198.8 Da PI: 6.6054 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35.8 | 1.6e-11 | 140 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEE.EE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkv.ersaedpkvveitYegeHnhe 59 +D ++WrKYG K++ gse+p sY ++Cp+kk v +++++dp + +t eH++e Zpz_sc00208.1.g00410.1.sm.mk 140 NDRFHWRKYGEKKILGSEYP-SY--SDDHKCPAKKYVpQHNNSDPPQFLVTLVHEHTCE 195 79******************.66..3566********5567789************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.8E-12 | 128 | 195 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-11 | 135 | 195 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-16 | 139 | 196 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.454 | 140 | 197 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.1E-12 | 140 | 195 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MSTRPKSETV SPPPPSPRAT SNQRDAAIQE LRRVSHLAAK LRQQLELIPE VDRLEAAADN 60 VSEIADAMES SLSILQSASE QYYSSEAGAM AMALPAVHSS DGSTGASRIA VPRARKVRHG 120 RGRLGEEVPI KEILTDAPEN DRFHWRKYGE KKILGSEYPS YSDDHKCPAK KYVPQHNNSD 180 PPQFLVTLVH EHTCEIFFRD EPSSSRSGSL QVLDFRNASV CPPLTATTLG LKKEEYTNIS 240 MYMHSYEYEL SQQMMPPNGD QANFSPGPRW S |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00208.1.g00410.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022681297.1 | 1e-87 | probable WRKY transcription factor 63 | ||||
TrEMBL | K3Z8R3 | 3e-86 | K3Z8R3_SETIT; Uncharacterized protein | ||||
STRING | Si022933m | 6e-87 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9993 | 29 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 5e-13 | WRKY DNA-binding protein 55 |