PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00194.1.g00420.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 270aa MW: 28104.5 Da PI: 8.1397

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00194.1.g00420.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	205.6	1.4e-63	23	169	1	149
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleea 79 gg+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e++ Zpz_sc00194.1.g00420.1.sm.mkhc 23 GGGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGTKPPERM 101 689************************************************************************** PP DUF822 80 eaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149 + +g+s s sp ss+q +sp++sy+asp+ss fps +s+ +++ ++ + +lp+l++ s+ ++s Zpz_sc00194.1.g00420.1.sm.mkhc 102 DGIGCSVSPSPYSSYQ--------TSPRASYNASPNSSLFPSGASSPFLPPTDIangidgNPILPWLKTFSNGTAS 169 **************........8888888888888888888887777666555667768899999988876666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-61	24	163	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MESGGGGGGG GPFVPGGGGG GGGGGGRMPT WRERENNKRR ERRRRAIAAK IFAGLRAHGG 60 YKLPKHCDNN EVLKALCNEA GWVVEPDGTT YRKGTKPPER MDGIGCSVSP SPYSSYQTSP 120 RASYNASPNS SLFPSGASSP FLPPTDIANG IDGNPILPWL KTFSNGTASK KHPLLPPLLI 180 HGGSISAPEA IPVCNSLRMC TPGQSGTCSP AIPGMPGHPD VHMMDAVSDE FAFGSSTNGG 240 QQAAGLVRAW EGERIHEESG SDDLDVTLKL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	8e-23	27	97	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	8e-23	27	97	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	8e-23	27	97	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	8e-23	27	97	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00194.1.g00420.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010675300.1	3e-78	PREDICTED: BES1/BZR1 homolog protein 4
Swissprot	Q0JPT4	5e-67	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	M8B8X5	4e-87	M8B8X5_AEGTA; Uncharacterized protein
STRING	EMT21245	7e-88	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	2e-50	BES1/BZR1 homolog 3

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]