PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00189.1.g00210.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family B3
Protein Properties Length: 552aa    MW: 59772.3 Da    PI: 8.4375
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00189.1.g00210.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.51.1e-17361449197
                                   EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                   ffkv+ p+ +++   l +p +f  e+ ++ ++  + ++l+ +sg sW+v l  +  s++ v+t+GWkeF++++ L  g f+
  Zpz_sc00189.1.g00210.1.am.mk 361 FFKVFFPEQSGEG--LKIPSTFH-EYvEKAPN--RVVSLRGPSGHSWRVVL--TTDSQGLVFTQGWKEFARDHSLIPGHFL 434
                                   8999988887765..9******9.55365544..48***************..**************************** PP

                                   EEEE-SSSEE..EEEEE CS
                            B3  81 vFkldgrsefelvvkvf 97 
                                   +F++dg sef   v vf
  Zpz_sc00189.1.g00210.1.am.mk 435 LFTYDGCSEF--SVAVF 449
                                   ****986776..66665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.1E-21359450IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.39E-19360450IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.5E-14361455IPR003340B3 DNA binding domain
PfamPF023628.8E-15361447IPR003340B3 DNA binding domain
CDDcd100172.20E-16361449No hitNo description
PROSITE profilePS5086313.07374452IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
MQGASVGEDG RRPGAVAGRE EGGTDAAHTL LSVLPFPCDP PLHLFSGNAL DSLHLLASLL  60
SPSPTLSSAH VVDASFLAAS TIDFDAAARS LFGHLTVARA APSREEAPRA HLRRGRHRCG  120
PGRRGGETGV EGAQIRWGQM NRWGEQSVGD GRWRSGVVLA RDVVQKIHFG GVPKVSPQVF  180
VPRWRRTPLE PGHRHCQRNC RLPLLTYSSC KGGGAAVSLT LERIGDGGMP CLACWCFGEV  240
GKPYPSSDVG GDSEVSQNSE FRCCVTRGED AMVAVTRRPE IRAPAGVRQP EIETEGHTKQ  300
QGSSSAAAAT AVMRNGMGKE KEKQVEKGRD RRKEKQSGKE QRKEIAREVQ DDVPVAAGEQ  360
FFKVFFPEQS GEGLKIPSTF HEYVEKAPNR VVSLRGPSGH SWRVVLTTDS QGLVFTQGWK  420
EFARDHSLIP GHFLLFTYDG CSEFSVAVFT PLGVEDKAAL KVQPCKELLV KQEEEEGTLD  480
VAADGTLEAS GTPFVEGNGA TTGKRVRDMD YEMTSGTAQK RHSSVQEKPK KKKPEATAAI  540
FPRNAHGVFH SG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00189.1.g00210.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44613766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.17e-16B3 family protein