 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc00187.1.g00600.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
TCP |
| Protein Properties |
Length: 273aa MW: 29329.6 Da PI: 9.4544 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00187.1.g00600.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 96.9 | 3.9e-30 | 45 | 119 | 3 | 74 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...e 74
g+kdrhsk+ T +g+RdRRvRlsa++a++++dLqd+LG+ ++sk ++WLl++a ++i++l+ ++++++ +
Zpz_sc00187.1.g00600.1.sm.mk 45 GGKDRHSKVKTVKGLRDRRVRLSAPTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPQDLVvghL 119
78*************************************************************888883333221 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0030154 | Biological Process | cell differentiation |
| GO:0031347 | Biological Process | regulation of defense response |
| GO:0045962 | Biological Process | positive regulation of development, heterochronic |
| GO:0009507 | Cellular Component | chloroplast |
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MISSNNRQAA DEELARKQHA AVASSRQQWS AQTESRIVRV SRVFGGKDRH SKVKTVKGLR 60
DRRVRLSAPT AIQLYDLQDR LGLNQPSKVV DWLLNAARHE IDKLPPLQFP PQDLVVGHLP 120
LVHEEKFGHH VAAAAALANE RAKAGHADAD VESGAHHHLG RFPGGYHRFM GLNSSLGMVN 180
SAMAAFNDYS GEAWNNNNVH DSGAGSPHVA AAAAAAAAAA QHSSFPSLLS LAPGPHQQVF 240
YSSEADQQFQ VGNLGSQGLS LSSVRAFHDQ TGS
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT085548 | 1e-113 | BT085548.1 Zea mays full-length cDNA clone ZM_BFc0031O04 mRNA, complete cds. |
| GenBank | BT085813 | 1e-113 | BT085813.1 Zea mays full-length cDNA clone ZM_BFc0067G09 mRNA, complete cds. |
| GenBank | BT086223 | 1e-113 | BT086223.1 Zea mays full-length cDNA clone ZM_BFc0133E08 mRNA, complete cds. |
| GenBank | EU970217 | 1e-113 | EU970217.1 Zea mays clone 342355 TCP family transcription factor containing protein mRNA, complete cds. |
| GenBank | KJ728008 | 1e-113 | KJ728008.1 Zea mays clone pUT6143 TCP transcription factor (TCP30) mRNA, partial cds. |
