PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00121.1.g00240.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 137aa MW: 15131.2 Da PI: 10.208 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 57.6 | 2.7e-18 | 93 | 129 | 2 | 38 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 r+rWtpeLHe+Fveav+ LGGsekAtPk+ ++mk+ Zpz_sc00121.1.g00240.1.sm.mk 93 LRMRWTPELHEQFVEAVNLLGGSEKATPKAAQKVMKL 129 69*********************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 4.3E-7 | 89 | 128 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.9E-13 | 91 | 128 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.3E-12 | 92 | 128 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MVWAPRGGGL VRGFVDLLGL AGGRTSSAAS ATWRCGEVKN ARRWPWALFF EEDVDARSLT 60 PKNHLLRSSL PPFNYDEIST DNLPSSSTTP TKLRMRWTPE LHEQFVEAVN LLGGSEKATP 120 KAAQKVMKLV HGQREAA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00121.1.g00240.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002454768.2 | 4e-24 | protein PHOSPHATE STARVATION RESPONSE 2 isoform X2 | ||||
Refseq | XP_021315087.1 | 4e-24 | protein PHOSPHATE STARVATION RESPONSE 2 isoform X1 | ||||
Refseq | XP_021315088.1 | 4e-24 | protein PHOSPHATE STARVATION RESPONSE 2 isoform X3 | ||||
TrEMBL | A0A0A9MIF3 | 4e-28 | A0A0A9MIF3_ARUDO; Uncharacterized protein | ||||
STRING | Sb04g036955.1 | 2e-23 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP28462 | 3 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04450.2 | 1e-15 | G2-like family protein |