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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc00117.1.g00320.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 327aa MW: 35795.4 Da PI: 9.3956 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00117.1.g00320.1.am.mk | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 94.8 | 5.8e-30 | 87 | 198 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvk 70
f+kv tpsdv+k++rlv+pk++ae++ +++ ++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk
Zpz_sc00117.1.g00320.1.am.mk 87 FEKVVTPSDVGKLNRLVIPKQHAERYfpalgsaaseaASNEGKGLVLSFEDREGKAWRFRYSYWNSSQSYVMTKGWSRFVK 167
99*******************************999988888999************************************ PP
HHT--TT-EEEEEE-.SS..SEE..EEEEE- CS
B3 71 angLkegDfvvFkld.gr..sefelvvkvfr 98
+++L +gD+v F + g+ ++++++ ++r
Zpz_sc00117.1.g00320.1.am.mk 168 EKRLGAGDTVAFARGtGDaaARGRFFIDFCR 198
************9443332455666666666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MLASVGTQLL NDRSQSRSCS HPPSVEEGEE IPIVKVNSYS TQLEQQLESR GVERVPMEFG 60 RIAAAQEDSE RARGGGGVAW LEREHMFEKV VTPSDVGKLN RLVIPKQHAE RYFPALGSAA 120 SEAASNEGKG LVLSFEDREG KAWRFRYSYW NSSQSYVMTK GWSRFVKEKR LGAGDTVAFA 180 RGTGDAAARG RFFIDFCRRR QDVAFLQPSA LQRLPLPSVP ISCPWPQEYG AYNPAAAPNR 240 HVLFLRPQMP SAVVLTSVPV RVAASAVEAT RSKRVRLFGV NLDSPPVMED NSRATGTVST 300 FLQLPSPSSS TSSSTAGKDL CSLDLGL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 5e-53 | 82 | 199 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 5e-53 | 82 | 199 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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