 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc00079.1.g00210.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
C2H2 |
| Protein Properties |
Length: 134aa MW: 14339.7 Da PI: 5.7102 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00079.1.g00210.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 17 | 1.6e-05 | 35 | 57 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F ++ L H++ H
Zpz_sc00079.1.g00210.1.sm.mk 35 FTCTYCDKKFYSSQALGGHQNAH 57
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MDPNGGRSGE DDLDLNLSLQ PSLAPEPEPE PPGYFTCTYC DKKFYSSQAL GGHQNAHKFE 60
RSVAKRAREL AASRRHGAAG QGGERGTAAD DEARRGKELG IAAPSSRASS SQLIRASPEA 120
SRDLTDEIDL SLKL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU968700 | 8e-51 | EU968700.1 Zea mays clone 323547 zinc finger protein 2 mRNA, complete cds. |
