PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zpz_sc00064.1.g00330.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 901aa MW: 94789 Da PI: 9.7288

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00064.1.g00330.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	109.8	1.3e-34	30	90	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ al+cprC++t+tkfCyynny++ qPry+CkaC+ryWt+GG+ rn+PvGg++rk++k+s Zpz_sc00064.1.g00330.1.am.mk 30 PDVALACPRCNATETKFCYYNNYNMLQPRYLCKACKRYWTHGGSQRNIPVGGASRKQNKRS 90 567899**************************************************99876 PP
2	zf-Dof	109.3	1.9e-34	467	527	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ al+cprC++tntkfCyynny++ qPry+CkaC+ryWt+GG+ rn+PvGg++rk+ k+s Zpz_sc00064.1.g00330.1.am.mk 467 PDVALPCPRCHATNTKFCYYNNYNMLQPRYLCKACKRYWTHGGSQRNIPVGGASRKQSKRS 527 567899**************************************************98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-22	24	89	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-29	33	88	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.841	34	88	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	36	72	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-19	460	518	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.4E-29	470	525	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27	471	525	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	473	509	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 901 aa Download sequence Send to blast
MQEARNMRQA RAARQQAAAN VGERRARPQP DVALACPRCN ATETKFCYYN NYNMLQPRYL 60 CKACKRYWTH GGSQRNIPVG GASRKQNKRS SASSSLPAAA ASSSSVINKE LQQQLLPAAP 120 MIEAAADFSN VFPSFMPTGF EHHSNQLPFS PAPAPLPLPT LLPPVPMLAS DAGTPSFLDM 180 LRGGFLDYQT NGFYAPATAS SGMEAPPPLP FGPAVQPGVA GILQGGGAAP TGGRVDATAA 240 GQGAAWPKPQ AHPQRAGSDG SGEATEDAHD GGGCSGAGRT LTRTHIDLFP AIIRMLFHVY 300 GAAAVTLGIQ MAVGMLPPGC TVDAWSARST RTSAVLPCRA SCLHGNSVSI SISSCMDRVL 360 ADVICTPIMP GDMWGPFYPL PPHRPLSPLL DFLVVLSPRR VQYKMEGNLF CGSEEKMTNS 420 KKSNTSAGAS SAHSNNIQQE ARNMRQARAA RQQVAANAGE RRPRPQPDVA LPCPRCHATN 480 TKFCYYNNYN MLQPRYLCKA CKRYWTHGGS QRNIPVGGAS RKQSKRSSAS LSLPAAASSS 540 SVINKELQQQ LLPAAPMIEP AADFNVFPSF MSTGFEHHGN QLPFSPAPAP LPLPTLLPPA 600 PVLAPDAGTP SFLDMLRGGF LDYQTNGFYA PATPSTGMEA PPPLPFGGAA QPGVAGGRQG 660 GGAAPTGGHV DATAAGQGAA WPKPQGRTPS QPFLSPSRRI VAVRASVFSA PPPSPLSAPD 720 PPPPRTATAQ TSPSAVSLPS ARHSLCSLSP TCVLYRTSAA RCRAHPSPPP NPSPGLCTTP 780 PLASLVVPYA RGHGVHSALL VPVVSSLPRQ SVNRIGCGID GSGFERQLGT VVAACSGRGV 840 ARLSLLACTP VHTRALPALH PHSCARLSSY QLVALVEAGV QPDHLSHIWV HHNLIINPRQ 900 E

Sequence ? help Back to Top

Protein Sequence Length: 901 aa Download sequence Send to blast

MQEARNMRQA RAARQQAAAN VGERRARPQP DVALACPRCN ATETKFCYYN NYNMLQPRYL  60
CKACKRYWTH GGSQRNIPVG GASRKQNKRS SASSSLPAAA ASSSSVINKE LQQQLLPAAP  120
MIEAAADFSN VFPSFMPTGF EHHSNQLPFS PAPAPLPLPT LLPPVPMLAS DAGTPSFLDM  180
LRGGFLDYQT NGFYAPATAS SGMEAPPPLP FGPAVQPGVA GILQGGGAAP TGGRVDATAA  240
GQGAAWPKPQ AHPQRAGSDG SGEATEDAHD GGGCSGAGRT LTRTHIDLFP AIIRMLFHVY  300
GAAAVTLGIQ MAVGMLPPGC TVDAWSARST RTSAVLPCRA SCLHGNSVSI SISSCMDRVL  360
ADVICTPIMP GDMWGPFYPL PPHRPLSPLL DFLVVLSPRR VQYKMEGNLF CGSEEKMTNS  420
KKSNTSAGAS SAHSNNIQQE ARNMRQARAA RQQVAANAGE RRPRPQPDVA LPCPRCHATN  480
TKFCYYNNYN MLQPRYLCKA CKRYWTHGGS QRNIPVGGAS RKQSKRSSAS LSLPAAASSS  540
SVINKELQQQ LLPAAPMIEP AADFNVFPSF MSTGFEHHGN QLPFSPAPAP LPLPTLLPPA  600
PVLAPDAGTP SFLDMLRGGF LDYQTNGFYA PATPSTGMEA PPPLPFGGAA QPGVAGGRQG  660
GGAAPTGGHV DATAAGQGAA WPKPQGRTPS QPFLSPSRRI VAVRASVFSA PPPSPLSAPD  720
PPPPRTATAQ TSPSAVSLPS ARHSLCSLSP TCVLYRTSAA RCRAHPSPPP NPSPGLCTTP  780
PLASLVVPYA RGHGVHSALL VPVVSSLPRQ SVNRIGCGID GSGFERQLGT VVAACSGRGV  840
ARLSLLACTP VHTRALPALH PHSCARLSSY QLVALVEAGV QPDHLSHIWV HHNLIINPRQ  900
E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	655	661	GGRQGGG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00064.1.g00330.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004980592.1	5e-45	dof zinc finger protein PBF
TrEMBL	A0A368S7T6	1e-43	A0A368S7T6_SETIT; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22474	3	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	1e-29	Dof family protein