PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00058.1.g00610.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 276aa    MW: 29225.4 Da    PI: 6.7221
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00058.1.g00610.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.21.6e-123559125
                       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                                  kprlrWt eLH+rFv+av+qLGG++
  Zpz_sc00058.1.g00610.1.am.mk 35 KPRLRWTAELHDRFVDAVAQLGGPD 59
                                  79*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.8E-113263IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-73560IPR006447Myb domain, plants
PfamPF143791.2E-2384129IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MFPSNSKKHS TASSNDRPMC VQGDSGGLVL TTDPKPRLRW TAELHDRFVD AVAQLGGPDT  60
MEMQRNVASS SGAMARSMSD RSVNVNEALR IQMEVQRRLH GELEVQKHLQ MRVEAQGKYM  120
QSILEKAYQA IGSSEFATWP SGYKSLGNQA AALDIGGSSS MGFSSLQDLH FYGGSSSSYM  180
DQHQPIMDHT FLTLGESGAG TAAAGSSASK KGPAASSSNH CSSTSNSSMM WAGGEEQAKN  240
AAATGQQLQM GSSSTNVMDK RLQAGDDVVS AITASA
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00058.1.g00610.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3651421e-46AK365142.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031F05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012700824.11e-116myb family transcription factor APL
TrEMBLK3XY571e-114K3XY57_SETIT; Uncharacterized protein
STRINGSi006865m1e-115(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25043890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.23e-42G2-like family protein