PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 311aa MW: 34046.5 Da PI: 6.7086

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00053.1.g00180.1.am.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.2	1.8e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt++LHerFveav+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Zpz_sc00053.1.g00180.1.am.mkhc 46 RQRLRWTNDLHERFVEAVTQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100 58****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.478	43	103	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.7E-32	45	101	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.0E-17	45	100	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.0E-25	47	101	IPR006447	Myb domain, plants
Pfam	PF00249	1.1E-8	48	99	IPR001005	SANT/Myb domain
Pfam	PF14379	3.6E-23	133	178	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MHSTKPEASF GQAHTDSVIN QQQMVLAGND MGPSNGANSN TNMAARQRLR WTNDLHERFV 60 EAVTQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYIPDSATD GNKVDNKDPG 120 DLLAGLEGSS GLQISEALKL QMEVQKRLHE QLEVQRQLQL RIEAQGKYLE KIIEEQQRFS 180 GVKPEMPLAG ASVTVSSNEQ FPDSERTEPS TPAPKSESPT QGASNRDNGG RTEAPKSPCH 240 DDSLSHHEPL TPDSNHQPGS PTASPNHERA AKRQRARSTE FSQGDCSLTG HIFESSSGSE 300 FQQYSMSYSG H

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	9e-23	46	103	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	9e-23	46	103	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	9e-23	46	103	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	9e-23	46	103	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00252	DAP	Transfer from AT2G01060	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00053.1.g00180.1.am.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001152613.1	1e-180	MYB-CC type transfactor
Refseq	XP_023156307.1	1e-180	MYB-CC type transfactor isoform X1
Swissprot	Q9SJW0	3e-98	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A3L6DZW5	1e-178	A0A3L6DZW5_MAIZE; Myb family transcription factor PHL7
TrEMBL	B4F7W7	1e-178	B4F7W7_MAIZE; MYB-CC type transfactor
TrEMBL	K4JRK4	1e-178	K4JRK4_MAIZE; G2-like transcription factor (Fragment)
STRING	GRMZM2G173943_P02	1e-179	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	5e-85	G2-like family protein