PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00050.1.g00510.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 346aa MW: 37454.6 Da PI: 8.7795

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00050.1.g00510.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.1	5.8e-11	19	78	3	62
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e +r r+ +NR++Ar+sR ++++ ++eL+ +++ L eN+aL+ ++ + l+++ Zpz_sc00050.1.g00510.1.am.mk 19 EERRRNRMTSNRLSARKSRMKRQQHVDELTARAERLGRENTALRASVDGALLRCRLLEQQ 78 567889**************************************9988766666655555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-10	17	77	No hit	No description
SMART	SM00338	1.2E-13	17	81	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.484	19	66	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.8E-8	19	77	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.19E-8	21	65	No hit	No description
CDD	cd14702	4.08E-15	22	73	No hit	No description
PROSITE pattern	PS00036	0	25	39	IPR004827	Basic-leucine zipper domain
Pfam	PF02672	1.4E-5	306	346	IPR003823	Domain of unknown function CP12

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MAQPATAPQG TRRAAVTEEE RRRNRMTSNR LSARKSRMKR QQHVDELTAR AERLGRENTA 60 LRASVDGALL RCRLLEQQNR VLAAHARELC ATLLLRNSQL RTLGDFADVP LDVPGVPDHL 120 ARLYGGDNTQ MAVPSPPEPA PPMPPVPLEV QMLFWPDAAM DAAISMLGWM LTRRSNMTVL 180 RLGHWATVWS AMNHDSASTR TGLSFGPGRA LAAGGDPAGR FRIKKMTLGH GRIRSTSLLS 240 TRYDAPWHSS QMHVVYGGCF SGSEDPRPVS GPAAGSPECR VVCGPPGARV LVAGGERGCH 300 ATPSDLANRV SESIKPAEEM CTDDPVSGEC AAAWDRDEVE KLSATA

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MAQPATAPQG TRRAAVTEEE RRRNRMTSNR LSARKSRMKR QQHVDELTAR AERLGRENTA  60
LRASVDGALL RCRLLEQQNR VLAAHARELC ATLLLRNSQL RTLGDFADVP LDVPGVPDHL  120
ARLYGGDNTQ MAVPSPPEPA PPMPPVPLEV QMLFWPDAAM DAAISMLGWM LTRRSNMTVL  180
RLGHWATVWS AMNHDSASTR TGLSFGPGRA LAAGGDPAGR FRIKKMTLGH GRIRSTSLLS  240
TRYDAPWHSS QMHVVYGGCF SGSEDPRPVS GPAAGSPECR VVCGPPGARV LVAGGERGCH  300
ATPSDLANRV SESIKPAEEM CTDDPVSGEC AAAWDRDEVE KLSATA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00050.1.g00510.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12504	28	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	2e-11	basic region/leucine zipper motif 53