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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc00028.1.g00050.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 157aa MW: 17036.3 Da PI: 10.4296 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.2 | 1.4e-11 | 41 | 85 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ +rk++NR++A+rsR+RK+ +++ L+ v++L a N aL k + Zpz_sc00028.1.g00050.1.sm.mk 41 RKRKRKESNRLSAQRSRARKQRQLDDLTAHVAALRARNGALTKAA 85 6789************************************99765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-9 | 33 | 83 | No hit | No description |
SMART | SM00338 | 1.2E-8 | 37 | 101 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.714 | 39 | 83 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-9 | 40 | 84 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.38E-8 | 41 | 86 | No hit | No description |
CDD | cd14702 | 1.16E-13 | 42 | 92 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 44 | 59 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MASPGMMSST VTASPSPSPA GSDSAYQAQH AAVPASVTEE RKRKRKESNR LSAQRSRARK 60 QRQLDDLTAH VAALRARNGA LTKAAHDAVR RCVAVQAENE MLRARSLELG ARLQSLLQLI 120 QYMDAATSAL AVYDPSPFAG AMLHQQPLLD ATMYNYN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 40 | 45 | RKRKRK |
2 | 40 | 46 | RKRKRKE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc00028.1.g00050.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU942576 | 4e-62 | EU942576.1 Zea mays clone 1520176 mRNA sequence. | |||
GenBank | EU973298 | 4e-62 | EU973298.1 Zea mays clone 396372 common plant regulatory factor 7 mRNA, complete cds. | |||
GenBank | KJ728383 | 4e-62 | KJ728383.1 Zea mays clone pUT6666 bZIP transcription factor (bZIP21) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004968894.1 | 5e-44 | ocs element-binding factor 1 | ||||
TrEMBL | A0A1E5VQF2 | 6e-45 | A0A1E5VQF2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ea01670.1.p | 1e-43 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 2e-12 | basic leucine-zipper 44 |