PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00020.1.g00440.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 338aa    MW: 36932.7 Da    PI: 6.5176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00020.1.g00440.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.2e-15144197457
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                     +k+ rr+ +NRe+ArrsR+RK+  +  Le  v +L+ eN +L k+l  ++++++
  Zpz_sc00020.1.g00440.1.sm.mkhc 144 VKKMRRMLSNRESARRSRRRKQIHLNDLESQVSSLTDENASLLKRLVDMTQKYK 197
                                     799************************************999966665555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-15141205IPR004827Basic-leucine zipper domain
PfamPF001701.2E-13143196IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955143195IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-12144195No hitNo description
Gene3DG3DSA:1.20.5.1703.6E-13145197No hitNo description
PROSITE patternPS000360148163IPR004827Basic-leucine zipper domain
PfamPF124983.7E-19213318IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MPFPVRIPPP RARMFPRGGC EARQESGSFP RTAGFSGDEV AEVGCSYAAA LKRELDLYCA  60
AVAKSMDAKS QESSLGYPNS QASASSELIS QASFHGDRDG ASLFINSHII DNADSQGMSA  120
NTGILKEQSG DGDDLEEITN PANVKKMRRM LSNRESARRS RRRKQIHLND LESQVSSLTD  180
ENASLLKRLV DMTQKYKDAT FDNRNLIVDL EMMRRKVHIA EEAVRVTGAS MLLPPTTSDM  240
PVSSMPLTSC ASDAASLAVP VQENMHPFLQ QPLIHGNQFK LDLPNATISL SSREMVTMAV  300
SLRGVASMEN LQKRIHKDSV HSGTALPLSD PEALNDDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157164RRSRRRKQ
2159164SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00020.1.g00440.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805357.11e-125light-inducible protein CPRF2-like
TrEMBLA0A2T7EIZ51e-124A0A2T7EIZ5_9POAL; Uncharacterized protein
STRINGPavir.Cb00258.1.p1e-118(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.13e-26bZIP family protein