![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zpz_sc00004.1.g01760.1.sm.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
bZIP |
Protein Properties |
Length: 198aa MW: 22145.7 Da PI: 9.512 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zpz_sc00004.1.g01760.1.sm.mkhc | genome | ZGD | View Nucleic Acid |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Zpa&pid=Zpz_sc00004.1.g01760.1.sm.mkhc) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 21 | 7.1e-07 | 59 | 82 | 4 | 27 |
XCHHHCHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkae 27
k+ rr+++NReAAr+sR+RKk+
Zpz_sc00004.1.g01760.1.sm.mkhc 59 QKVLRRLAQNREAARKSRLRKKQL 82
5899*****************984 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MADANSRTDT SIVLDTDDKD QRDANVRLGS LKLENGHSGA AMASNSSDRS DRSDKPMDQK 60 VLRRLAQNRE AARKSRLRKK QLESSKLKLA SLEQELQKAR QQGIFISSSG DQTHSMSGNG 120 AMTFDLEYAR WQEEQNKQIN ELRAAVNAHA SDSDLRLIVD GIMAHYDEIF RQKGVAAKAD 180 VFHILSGMWK TPAERLTT
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Functional Description ? help
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Source |
Description |
UniProt | Plays a negative role in rice basal defense responses to the bacterial blight pathogen Xanthomomas oryzae pv. oryzae (Xoo). May function in both positive and negative regulation of rice defense genes. Binds DNA in vitro (PubMed:16045470). Acts as transcriptional activator when bound to NPR1/NH1 in vitro (PubMed:22353606). Binds to the promoter sequence of CRK10 in vitro (PubMed:27176732). {ECO:0000269|PubMed:16045470, ECO:0000269|PubMed:22353606, ECO:0000269|PubMed:27176732}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT066852 | 1e-145 | BT066852.1 Zea mays full-length cDNA clone ZM_BFb0077I20 mRNA, complete cds. |
GenBank | KJ727805 | 1e-145 | KJ727805.1 Zea mays clone pUT5757 bZIP transcription factor (bZIP52) mRNA, partial cds. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Yilmaz A, et al.
GRASSIUS: a platform for comparative regulatory genomics across the grasses. Plant Physiol., 2009. 149(1): p. 171-80 [PMID:18987217] - Chern M, et al.
A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation. Plant Methods, 2012. 8(1): p. 6 [PMID:22353606] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] - Chern M, et al.
A Genetic Screen Identifies a Requirement for Cysteine-Rich-Receptor-Like Kinases in Rice NH1 (OsNPR1)-Mediated Immunity. PLoS Genet., 2016. 12(5): p. e1006049 [PMID:27176732]
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