PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma99g00310.1 | ||||||||
Common Name | ZOSMA_99G00310 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | FAR1 | ||||||||
Protein Properties | Length: 346aa MW: 39496.8 Da PI: 9.2123 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.9 | 1.3e-16 | 74 | 164 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y ++A+ GFsvr ++k+ k++g+ ++++ Csk+g+++ ++ +rr++ ++r+gC a++k k+ + ++kw+ + ++++HnH+++ Zosma99g00310.1 74 YYDFASGKGFSVRLGSTKNVldKQSGQLEMKRLLCSKQGSPSLILPPSDGTRRKNGVSRCGCMANIKFKRIDrSDKWVTDIVNHDHNHPFT 164 999***********999988889*******************99999999*********************99***************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 6.0E-13 | 74 | 164 | IPR004330 | FAR1 DNA binding domain |
Pfam | PF10551 | 1.7E-6 | 286 | 322 | IPR018289 | MULE transposase domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MRKSSADIRE SSANVATGTA KTPNNHFKRK FSSPGQNQTF LDHHSSSSTY RQSSKPCPIV 60 GQVFPSYEMT LQSYYDFASG KGFSVRLGST KNVLDKQSGQ LEMKRLLCSK QGSPSLILPP 120 SDGTRRKNGV SRCGCMANIK FKRIDRSDKW VTDIVNHDHN HPFTTPSKIR YLPINRSISE 180 TSKVLFSSLD EVNVPVSQQT AYFSNQVGGL QNMGCMTLDI NNMVRDNHVD LKNYDVDLIV 240 EEFEIRKLEN NDFFYDLVKD DEGRLRHLFW ADLIMIENYK LFEDSVTFDT TYKTNVYSMV 300 FGMFCGVNHH RKTTIFGSAF LRYSISIFYL HSYILSPLNH FIPMK* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NH81 | 0.0 | A0A0K9NH81_ZOSMR; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1424 | 4 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-31 | FAR1-related sequence 5 |
Link Out ? help Back to Top | |
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Phytozome | Zosma99g00310.1 |