PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma8g01730.1 | ||||||||
Common Name | ZOSMA_8G01730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | bZIP | ||||||||
Protein Properties | Length: 162aa MW: 18925.6 Da PI: 9.4286 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.5 | 6.2e-13 | 74 | 121 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++ rr+++NRe+ArrsR RK++ ++eL vk L N++L +e+++ Zosma8g01730.1 74 RKRRRMISNRESARRSRMRKQKHLDELWLQVKHLLVINQKLVEEINRV 121 5789*****************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-12 | 70 | 134 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.14 | 72 | 135 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-12 | 74 | 124 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-9 | 74 | 129 | No hit | No description |
Pfam | PF00170 | 4.7E-10 | 74 | 122 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.90E-16 | 75 | 121 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 77 | 92 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MQPLEDVSNI QYILRPPTMD STCCFDMNSF LTHSHDPSCA ITSSVKKSPA TCRSNESSSG 60 ETVDEQRRRL INERKRRRMI SNRESARRSR MRKQKHLDEL WLQVKHLLVI NQKLVEEINR 120 VVANHDHLVI ENSQLRNNKS VLRQILLDFG VEEKIFTLEE R* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 77 | RKRRR |
2 | 73 | 94 | RKRRRMISNRESARRSRMRKQK |
3 | 86 | 93 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NJT1 | 1e-114 | A0A0K9NJT1_ZOSMR; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 9e-21 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Zosma8g01730.1 |