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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma86g00620.1 |
| Common Name | ZOSMA_86G00620 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
FAR1 |
| Protein Properties |
Length: 304aa MW: 34123.6 Da PI: 8.9313 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma86g00620.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 41.3 | 5e-13 | 107 | 199 | 3 | 90 |
FAR1 3 YneYAkevGFsvrkskskks....krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
Y ++A+ +GFsvr ++k+ ++ + +++ Csk+g++ t+ +rr++ ++++gC a++k k+ +++w+ ++++ +HnH+++
Zosma86g00620.1 107 YYDFASFIGFSVRLGSTKNIldkeIGQKILVIKRLLCSKQGSPILILPPTNGTRRKNGVSKCGCLASIKFKRIGrSDNWVTDSVNFDHNHTFT 199
999***********99887665423344566799*********999999999********************999***************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MIYGTAKIPN SMNYQFNSPH CQTNVNPIAS NVNVSTSLDP DIVHNTFFDS EYVQSASADI 60
RESSAQIRAN SANVSSGTAK TPDIHFKRKS SSPGEVFPSY ENTVQSYYDF ASFIGFSVRL 120
GSTKNILDKE IGQKILVIKR LLCSKQGSPI LILPPTNGTR RKNGVSKCGC LASIKFKRIG 180
RSDNWVTDSV NFDHNHTFTT PSKIRYLPIN RSISHTSKLL FSSLAEVNVP VSQQAAYFSN 240
QLGGPQNMGC MTLNINNMVR DDHIDLKNYD VYLIVEEFEM KKLENRDFFY DLVKDDCRLK 300
HFF*
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