PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma80g00420.1
Common NameZOSMA_80G00420
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 176aa    MW: 19883.8 Da    PI: 6.501
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma80g00420.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.97.8e-123491562
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                     ++ +r+ +NR +ArrsRqRK++ ++ L +   +L +eN++   + ++  +++ +++se
  Zosma80g00420.1 34 RKRKRMLSNRDSARRSRQRKQKHLDDLMNQLSQLRKENEQIHATHNMTIQQYHAVESE 91
                     67899**********************************9999888888887777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.5E-123094IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3353274IPR004827Basic-leucine zipper domain
PfamPF001706.3E-93477IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-934107No hitNo description
SuperFamilySSF579592.41E-113488No hitNo description
CDDcd147022.73E-173586No hitNo description
PROSITE patternPS0003603752IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MGCGDFSNSS SGSGSGSGSG CCSMEKSTVV VDQRKRKRML SNRDSARRSR QRKQKHLDDL  60
MNQLSQLRKE NEQIHATHNM TIQQYHAVES ESSLLRTQIM ELNSRYHALY EILDYVNTTT  120
ACNDNDNNNT DNNNNTSGYA SDLFTQQQSM DMIHFWNPFS ANNFSMVASE DLFLC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13354RKRKRMLSNRDSARRSRQRKQK
24652RRSRQRK
34653RRSRQRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011048821.19e-36PREDICTED: ocs element-binding factor 1-like
SwissprotC0Z2L52e-29BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A0K9NMD21e-127A0A0K9NMD2_ZOSMR; Basic-leucine zipper (BZIP) transcription factor family
STRINGPOPTR_0005s25290.15e-35(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.18e-30basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]