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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma77g00210.1 |
| Common Name | ZOSMA_77G00210 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
SRS |
| Protein Properties |
Length: 344aa MW: 36114.9 Da PI: 8.3341 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma77g00210.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 214.8 | 2e-66 | 111 | 274 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...............aeaaskrkrelkskk 82
+++sCqdCGnqakkdC+h+RCRtCCksr++ C thvkstWvpaakrrerqq+l++++++++ s+ + ++skr+re ++ +
Zosma77g00210.1 111 TSMSCQDCGNQAKKDCMHMRCRTCCKSRNLPCPTHVKSTWVPAAKRRERQQHLSSSMQQQSPSSrlhrasgadhgrgptTGETSKRPREITALA 204
5699************************************************999988877666689899888887776667777777765555 PP
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
+ l+ +++s++ + + s+P+evss+avfrcv+vs++dd++e++aYqtavsigGh+fkGiLydqG+e+
Zosma77g00210.1 205 CTRLAVSTISTSG-G-MEMMGSYPSEVSSPAVFRCVKVSAIDDADEQYAYQTAVSIGGHMFKGILYDQGPES 274
5555555544433.2.333456************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MAGFSLGGNQ PPSEEQIPPE NLFQYHSAGG GPANTSSRNE EITINYAKGF EIWQHHQQHL 60
QQQHQRHHQL QLYSSGLGIY ADDALAGAGP STIAIGSGSG GTGRGLRGAG TSMSCQDCGN 120
QAKKDCMHMR CRTCCKSRNL PCPTHVKSTW VPAAKRRERQ QHLSSSMQQQ SPSSRLHRAS 180
GADHGRGPTT GETSKRPREI TALACTRLAV STISTSGGME MMGSYPSEVS SPAVFRCVKV 240
SAIDDADEQY AYQTAVSIGG HMFKGILYDQ GPESQYSGGG GGGGGGSSSS PVAITSSSAA 300
SIGTSTAAAV AASSMMDPSS TFYSTTPFNV FLSGTQFFPH PRQ*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 276 | 286 | SGGGGGGGGGS |
