PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma75g00700.1
Common NameZOSMA_75G00700
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family CAMTA
Protein Properties Length: 1017aa    MW: 115317 Da    PI: 6.7089
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma75g00700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1177.61.6e-55221382118
             CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                      ++ ++rwl++ ei++iL nf+++ ++ e+++rp+sgs++L++rk++ryfrkDGy+w+kkkdgktv+E+he+LK g+++vl+cyYah+een +fq
  Zosma75g00700.1  22 IDAQSRWLRPAEICEILRNFQNFCIAPEPPNRPPSGSIFLFDRKILRYFRKDGYNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENDKFQ 115
                      56799***************************************************************************************** PP

             CG-1  96 rrcywlLeeelekivlvhylevk 118
                      rr+yw+Lee++ +ivlvhy+evk
  Zosma75g00700.1 116 RRSYWMLEEKYMHIVLVHYREVK 138
                      ********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.09317143IPR005559CG-1 DNA-binding domain
SMARTSM010769.1E-7620138IPR005559CG-1 DNA-binding domain
PfamPF038597.5E-5024136IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.7E-6432520IPR013783Immunoglobulin-like fold
PfamPF018334.0E-7435520IPR002909IPT domain
SuperFamilySSF812961.87E-17435520IPR014756Immunoglobulin E-set
SuperFamilySSF484031.87E-17618734IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.203.5E-17620736IPR020683Ankyrin repeat-containing domain
CDDcd002043.50E-17620732No hitNo description
PROSITE profilePS5029718.033627734IPR020683Ankyrin repeat-containing domain
PfamPF127968.7E-8645735IPR020683Ankyrin repeat-containing domain
SMARTSM002480.36673702IPR002110Ankyrin repeat
SMARTSM0024819712741IPR002110Ankyrin repeat
SuperFamilySSF525409.03E-8834893IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.25842864IPR000048IQ motif, EF-hand binding site
PfamPF006120.018844863IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.206844872IPR000048IQ motif, EF-hand binding site
SMARTSM000150.025865887IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.194866890IPR000048IQ motif, EF-hand binding site
PfamPF006121.2E-4869887IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1017 aa     Download sequence    Send to blast
MSGNQLCAST TAQQLDVEQI LIDAQSRWLR PAEICEILRN FQNFCIAPEP PNRPPSGSIF  60
LFDRKILRYF RKDGYNWRKK KDGKTVKEAH ERLKAGSIDV LHCYYAHGEE NDKFQRRSYW  120
MLEEKYMHIV LVHYREVKGN KTSHTKGVVP HSVYDHSPVA SNSLTIRNQI TSQTTDANYP  180
DSVQISGYED SKMDNFQASS RHYPIPEMSQ FANLMDASLP KTCFPVFQNT QGDSEERGTT  240
VFDETKYEIT HNETKSQMGL TSLDEVLEYC NVEHQTHFPS TFHNNLESIP TRRKSVVSNH  300
EVSTGKLSSG IKDVANTYGQ ENLQFPGPDS FVMVSKKDAD NEINDDHCSI LNQPSTINDV  360
QGDKSLKKYD SFSRWMSKEL GQMDNSNMQS SSETYWDVAD SEGVVEDFSS SRQDDLYPYP  420
YVLSPSLSQD QYFSIIDFSP NWAYSDMETK VIITGTFIMS KIEVERCKWS CMFGEVEVPA  480
DALSDGILRC YAPPHKVGRV PFYVTCSNRL ACSEVREFEY LVSHAQYMEN SETYAGSKNE  540
MLLHIRLEEL LSLGLGTYES LELKMCHANY EKSLIRNQIS SLLLKSDERY ALAKKTNEIK  600
FSSRTSKDEL MQKLLKEKLH AWLLCKVVED GKGPNILDKE GQGVIHLAAG LGYDWAIKPI  660
VLAGVNINFR DARGWSALHW AAYFGRERTV AMLISLDTAP GALTDPTPEF PNGRTPADLA  720
SSNGHKGIAG YLAESSLTTH LSVLTLRDSL QTESIDIEDT TERHANKFDE RTVQTGSSLE  780
DSLSAVRSAT LAAASIQQVF RVQSFHRKKL VESSDTKCRM VGEHALSLVA IKTNKTRHSN  840
EPVHAAAIRI QNSFRGWKGK KEFTVIRQHI VKIQAHVRGH QVRKHFRKVV WSVGIVEKVI  900
LRWRRKGSGL RGFRSNALTK ISDIQIPSKD DGGDEDYDFL REGRKQTEQR MNRALSRVKS  960
MVQYPEARDQ YRRLLTGVEE LKDDAPGGTL EKETDDLMMF DVTELLGEED VHMSPA*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029119343.10.0calmodulin-binding transcription activator 3 isoform X2
TrEMBLA0A0K9NPW70.0A0A0K9NPW7_ZOSMR; Calmodulin-binding transcription activator 3
STRINGXP_008795547.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1