PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma75g00440.1
Common NameZOSMA_75G00440
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family C2H2
Protein Properties Length: 454aa    MW: 48761.6 Da    PI: 9.4936
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma75g00440.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00074220241323
                      ETTTTEEESSHHHHHHHHHH.T CS
          zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                      C++Cg++F  ++ ++ H  + H
  Zosma75g00440.1 220 CHKCGERFGKWEAMEAHHLSkH 241
                      *****************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280220241IPR007087Zinc finger, C2H2
SuperFamilySSF563991.06E-22243452No hitNo description
Gene3DG3DSA:3.90.228.101.0E-8254429IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MGRRGEDWEE VEEKKSTPKK QVWFALKKTL HCRSEPSEVY DPRSKGNLGS ILTRKGGRSG  60
CSRSIANLKD VIHGSKRHLE RPPSTCSPRS IGSSEFLNPI THEVILSNST CELKITGCHD  120
SGTGTSVGVG TTAGFTSTYV GTLKPGTPGP GGGGGFGGSL LYNSSLRGTI GATPPRKAPF  180
TGSALSNAVF GEGGFGGVGI HRASSRSRTS DSNTANTVGC HKCGERFGKW EAMEAHHLSK  240
HAVTELVEGD SSRKIVEIIC RTSWLKSETS CGRIERVLKI HNTQKTLARF EEYREMVKNK  300
ASKLPKKHPR CLADGNELLR FYGTTVECSL GMGGLSNLCT SEKCSACCII RHGFSTKKEV  360
LGGIGVFTTS TSGRAFESIS VSEQSNPCIR KALLVCRVIA GRVHRPLDNF QELTGQSGFD  420
SLAGKVGLYA NIEELYLLNS RALLPCFVVI CKP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267824.10.0PREDICTED: uncharacterized protein LOC104604941
RefseqXP_010267825.10.0PREDICTED: uncharacterized protein LOC104604941
TrEMBLA0A0K9NPF00.0A0A0K9NPF0_ZOSMR; C2H2 zinc finger protein
STRINGXP_010267823.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32772841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-159C2H2 family protein