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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma7444g00020.1 | ||||||||
Common Name | ZOSMA_93G00840 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | C2H2 | ||||||||
Protein Properties | Length: 141aa MW: 15246.3 Da PI: 9.6589 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0011 | 8 | 30 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H Zosma7444g00020.1 8 FECKTCSRQFSSFQALGGHRASH 30 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.5 | 0.0009 | 54 | 76 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C Cg +Fs L H+r+H Zosma7444g00020.1 54 HTCYVCGHMFSLGQALGGHMRRH 76 79********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 8.65E-7 | 7 | 76 | No hit | No description |
Pfam | PF13912 | 7.4E-12 | 7 | 30 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.42 | 8 | 30 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.097 | 8 | 35 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 10 | 30 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.6E-6 | 53 | 78 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.681 | 54 | 81 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 3.8 | 54 | 76 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 56 | 76 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
PITTAHVFEC KTCSRQFSSF QALGGHRASH GKPKLLNDYH VSILNPNRKP AKTHTCYVCG 60 HMFSLGQALG GHMRRHRGVS KKDHHEHMEK KNHGGGGGGG GGYHHNRTMS LDLNMAPPVA 120 MENDSEVGLL SFTLGLPQPC * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016667696.1 | 9e-31 | PREDICTED: zinc finger protein ZAT11-like | ||||
Refseq | XP_017618702.1 | 9e-31 | PREDICTED: zinc finger protein ZAT11-like | ||||
TrEMBL | A0A0K9NKZ5 | 2e-99 | A0A0K9NKZ5_ZOSMR; Putative Zinc finger protein | ||||
STRING | Gorai.013G023300.1 | 4e-30 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP501 | 37 | 157 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53600.1 | 8e-25 | C2H2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma7444g00020.1 |