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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma70g00490.1 |
| Common Name | ZOSMA_70G00490 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
LBD |
| Protein Properties |
Length: 266aa MW: 28571.6 Da PI: 9.8155 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma70g00490.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.7 | 2.8e-31 | 4 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+C++C+vlr++C++dC+++p++ p++q +++ +++k++G++ +l+l++a p+++r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q
Zosma70g00490.1 4 SCNGCRVLRKGCSEDCTIRPCLqwiksPEAQGNATVFLAKFYGRAGLLNLINAGPDKHRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNRQLCQ 97
6********************************************************************************************* PP
DUF260 90 lkaelallkee 100
+++e++l +e+
Zosma70g00490.1 98 AAVEAVLKGEP 108
****9988765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSEDCT IRPCLQWIKS PEAQGNATVF LAKFYGRAGL LNLINAGPDK 60
HRPAIFRSLL YEACGRIVNP IYGSVGLLWS GNRQLCQAAV EAVLKGEPIV QIPSEKAADI 120
SIPPLKTFDI RHVTKNAAKL NVSKASQTPF KLSSIGAGAK HVNRLRRPRR ERSHHESGGG 180
TTTTTTSSAS GSMISAETVE PSTPDPERRT TSVDPEDELD LTLGLGFSSS AKANKHSSLS 240
SCSPNQAKIP SERCRVDNLA LFLTA*
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